IEDB Analysis Resource

MHCII Weekly Benchmark results


Overall scores

Overall scores based on data sets submitted to the IEDB within a single week. The overall scores in the SRCC and AUC columns are calculated using performance values for only SRCC or AUC respectively. In the overall column, both evaluation types are used.

Server Overall SRCC AUC
NN-align 60 60 60
NetMHCIIpan-3.1 90 80 100
Comblib matrices 20 20 20
SMM-align 40 40 40
Tepitope (Sturniolo) 10 0 20
Consensus IEDB method 90 100 80

Data set specific results

Detailed information for the evaluated data sets used in the calculation of the overall scores in the table above. Predictions from each participating server for the data sets listed below may be downloaded here

IEDB
Reference
Allele Peptide
Count
Positive
Count
Measurement
type
NN-align NetMHCIIpan-3.1 Comblib matrices SMM-align Tepitope (Sturniolo) Consensus IEDB method
SRCC AUC SRCC AUC SRCC AUC SRCC AUC SRCC AUC SRCC AUC
 1029531   HLA-DRB1*01:01   11   4   ic50   0.564   0.857   0.727   1.000   0.205   0.571   0.492   0.696   -0.009   0.571   0.764   0.929